KAIST AI Ph.D. candidate - graph mining, retrieval, agentic AI

Structure-Aware AI Researcher

I study how complex relationships, dependencies, and reusable knowledge in real-world data can be represented, modeled, and used in AI systems. My research builds on graph and hypergraph methods, with recent extensions toward knowledge-structured memory and retrieval-augmented AutoML agents.

Research strengths

Turning Hidden Structure into Concrete ML Research

I find non-obvious structure in complex problems, formalize it as graph-based data or ML tasks, and carry it through modeling, experiments, and publication.

16 publications across KDD, WWW, ICDM, IJCAI workshops, AAAI workshops, ECML/PKDD workshops, and TKDD
6 first-author or co-first-author works
1 Best Paper Award at IEEE ICDM 2025
1 industry collaboration published at KDD Industry Track

Rigorous Task Formulation

I define concrete research problems from underexplored and messy real-world settings by clarifying assumptions, designing tasks, setting baselines, and building evaluation criteria.

task design benchmarking evaluation

Structure-Aware Modeling

I read complex data as entities, relations, groups, and higher-order interactions, then turn them into graph, hypergraph, or knowledge-graph representations.

graph mining hypergraphs knowledge graphs

Persistent System Building

I execute research end-to-end by building models and multi-agent systems that connect structured knowledge to planning, coding, debugging, and feedback.

multi-agent systems AutoML RAG
Current research

Graph memory for multi-agent AI.

My current direction explores how graph and hypergraph structures can serve as memory for multi-agent AutoML systems. The focus is on preserving useful workflow structure while allowing agents to retrieve, adapt, and recombine prior knowledge for new tasks.

Experience basis

Why this direction fits my record

Hypergraph foundation: problem formulation, analysis, sampling, generation, and learning for group-level interaction data.
Graph-structured retrieval: experience with large-scale search and graph-based structure, including satellite video retrieval for forecasting.
Multi-agent systems: direct NEC experience building planner-retriever-coder-debugger systems for ML automation.
Publications

Full research record.

My publications cover higher-order network modeling, graph learning, anomaly detection, temporal networks, large-scale retrieval, and AI system applications.

2026

TacitFlow: Learning Workflow Representations for Tacit-Knowledge-Grounded Machine Learning Engineering Agents

Yushan Jiang, Wenchao Yu, Minyoung Choe, Dongjin Song, Jingchao Ni, Wei Cheng, Haifeng Chen

KDD 2026 AI Data Scientist Workshop

knowledge graph constructionAutoMLRetrieval
2025

Attributed Hypergraph Generation with Realistic Interplay Between Structure and Attributes

Jaewan Chun*, Seokbum Yoon*, Minyoung Choe, Geon Lee, Kijung Shin

IEEE ICDM 2025 Best Paper Award

generative modelingstructure-attribute modeling
2025

SkySearch: Satellite Video Search at Scale

Minyoung Choe*, Geon Lee*, Changhun Han*, Suji Kim, Woong Hu, Hyebeen Hwang, Geunseok Park, Byeongyeon Kim, Hyesook Lee, Ha-Myung Park, Kijung Shin

ACM KDD 2025 - Industry Track

large-scale video retrievalweather AIdeployed system
2025

Kronecker Generative Models for Power-Law Patterns in Real-World Hypergraphs

Minyoung Choe, Jihoon Ko, Taehyung Kwon, Kijung Shin, Christos Faloutsos

The Web Conference (WWW) 2025

hypergraph analysisgenerative modelingpower-law patterns
2025

Identifying Group Anchors in Real-World Group Interactions Under Label Scarcity

Fanchen Bu, Geon Lee, Minyoung Choe, Kijung Shin

IEEE ICDM 2025

hypergraph analysislabel scarcity
2024

Representative and Back-In-Time Sampling from Real-world Hypergraphs

Minyoung Choe, Jaemin Yoo, Geon Lee, Woonsung Baek, U Kang, Kijung Shin

ACM Transactions on Knowledge Discovery from Data (TKDD)

samplinghypergraph analysistemporal hypergraph
2024

GraphEHR: Heterogeneous Graph Neural Network for Electronic Health Records

Minyoung Choe*, Juho Jung*, Kushagra Agarwal*, Nivedhitha Dhanasekaran*

IJCAI 2024 Workshop

graph neural networkshealthcare AI
2024

Graphlets over Time: A New Lens for Temporal Network Analysis

Deukryeol Yoon, Dongjin Lee, Minyoung Choe, Kijung Shin

ECML/PKDD 2024 Workshop

temporal networksgraphlets
2024

Temporal Graph Networks for Graph Anomaly Detection in Financial Networks

Yejin Kim*, Youngbin Lee*, Minyoung Choe, Sungju Oh, Yongjae Lee

AAAI 2024 Workshop

temporal graph networksanomaly detectionfinancial networks
2023

Classification of Edge-dependent Labels of Nodes in Hypergraphs

Minyoung Choe, Sunwoo Kim, Jaemin Yoo, Kijung Shin

ACM KDD 2023

hypergraph learninghypergraph neural networkcontext-aware prediction
2023

How Transitive Are Real-World Group Interactions? - Measurement and Reproduction

Sunwoo Kim, Fanchen Bu, Minyoung Choe, Jaemin Yoo, Kijung Shin

ACM KDD 2023

hypergraph analysisgenerative modeling
2022

Reciprocity in Directed Hypergraphs: Measures, Findings, and Generators

Sunwoo Kim, Minyoung Choe, Jaemin Yoo, Kijung Shin

IEEE ICDM 2022

hypergraph analysisgenerative modeling
2022

HashNWalk: Hash and Random Walk Based Anomaly Detection in Hyperedge Streams

Geon Lee, Minyoung Choe, Kijung Shin

IJCAI 2022

hyperedge streamsanomaly detection
2022

MiDaS: Representative Sampling from Real-world Hypergraphs

Minyoung Choe, Jaemin Yoo, Geon Lee, Woonsung Baek, U Kang, Kijung Shin

The Web Conference (WWW) 2022

samplinghypergraph analysis
2021

How Do Hyperedges Overlap in Real-World Hypergraphs? - Patterns, Measures, and Generators

Geon Lee*, Minyoung Choe*, Kijung Shin

The Web Conference (WWW) 2021

hypergraph analysishypergraph overlapgenerative modeling
2020

Pretraining Neural Architecture Search Controllers with Locality-based Self-Supervised Learning

Kwanghee Choi*, Minyoung Choe*, Hyelee Lee*

NeurIPS 2020 Workshop

self-supervised learningneural architecture search
Experience

Research roles and collaborations.

Each experience contributed a different layer to my current work: knowledge structuring, multi-agent systems, graph modeling, and scalable retrieval systems.

Jan 2026 - Present
Samsung
Industry-linked research project

Scientific evidence reasoning for R&D support

Identified scientific QA challenges where answers depend on conditions, context, and evidence across papers. Built paper-grounded evaluation data and applied multi-agent verification to improve grounding, answer support, and reliability.

scientific QAevidence reasoningmulti-agent verification
Jun - Sep 2025
NEC Laboratories America
Research Intern - Data Science & System Security

Time-series retrieval and multi-agent AutoML

Used time-series foundation models for multi-view similar-case retrieval and evidence-format analysis. Built a Planner-Retriever-Coder-Debugger AutoML agent with structured memory for feedback-driven ML pipeline improvement.

time-series predictionmulti-agent AutoMLstructured memory
Aug 2023 - Feb 2024
Carnegie Mellon University
Visiting Researcher

Compact generative modeling for real-world hypergraphs

Collaborated with Prof. Christos Faloutsos on principled hypergraph generative modeling, resulting in a WWW 2025 publication on reproducing real-world higher-order network patterns.

generative modelinghigher-order networksresearch collaboration
Jul 2021 - Dec 2024
Korea Meteorological Administration
Joint project

Similar past-case retrieval for weather forecasting

Built self-supervised satellite video retrieval to help forecasters find similar past weather cases from large historical archives. The deployed forecasting support system led to a KDD 2025 Industry Track publication as co-first author.

self-supervised learningreal-time retrievalweather AIKDD Industry Track
Background

Education, skills, and service.

Education
KAIST, M.S. and Ph.D. in Artificial Intelligence, advised by Prof. Kijung Shin. Expected February 2027.
Education
Sogang University, B.S. in Computer Science and Engineering. GPA 4.14/4.3, Summa Cum Laude, ranked 1st of 72.
Skills
Graph and hypergraph mining, knowledge graph construction, LLM agent systems, retrieval-augmented AI, PyTorch, PyTorch Geometric, DGL, Python, C/C++, Java.
Service
Co-organizer, PAKDD 2025 Workshop on Graph Learning with Foundation Models. Reviewer for ACM KDD, WWW, ACM CIKM, and PAKDD.
Awards
IEEE ICDM 2025 Best Paper Award, WWW 2021 Student Scholarship Award, Grand Prize in Open-Source Software Contribution, National Science and Technology Scholarship.